Transcript: lnc-AUNIP-6:1

Basic information

LNCipedia transcript ID: lnc-AUNIP-6:1 
LNCipedia gene ID: lnc-AUNIP-6
Location (hg19): chr1:26019032-26022684
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3653 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_887_NR_024498
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.1157 non-coding 
CPAT coding probability 18.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AUNIP-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL020996.1-6:1
4.0 lnc-AL020996.1-6:1
4.1 lnc-AL020996.1-6:1
5.0 lnc-AL020996.1-6:1
5.1 lnc-CRYBG2-11:1
5.2 lnc-AUNIP-6:1