Transcript: lnc-B3GLCT-6:2

Basic information

LNCipedia transcript ID: lnc-B3GLCT-6:2 
LNCipedia gene ID: lnc-B3GLCT-6
Location (hg19): chr13:31736344-31743451
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 7108 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000014230.1|ENCT00000111360.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.6759 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-B3GLCT-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-B3GALTL-6:2
5.0 lnc-B3GALTL-6:2
5.1 lnc-PDS5B-16:2
5.2 lnc-B3GLCT-6:2