Transcript: lnc-B3GNT10-21:12

Basic information

LNCipedia transcript ID: lnc-B3GNT10-21:12 
LNCipedia gene ID: lnc-B3GNT10-21
Location (hg19): chr9:123605362-123616649
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5210 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000226752.3|FTMT23500012385.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.2116 non-coding 
CPAT coding probability 48.96% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-B3GNT10-21:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PSMD5-AS1:31
5.0 PSMD5-AS1:31
5.1 lnc-B3GNT10-1:12
5.2 lnc-B3GNT10-21:12