Transcript: lnc-B3GNT10-21:16

Basic information

LNCipedia transcript ID: lnc-B3GNT10-21:16 
LNCipedia gene ID: lnc-B3GNT10-21
Location (hg19): chr9:123606767-123615299
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2195 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT134525
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -123.6658 non-coding 
CPAT coding probability 3.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-B3GNT10-21:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CNTRL-1:10
4.0 PSMD5-AS1:10
4.1 PSMD5-AS1:10
5.0 PSMD5-AS1:10
5.1 lnc-B3GNT10-1:16
5.2 lnc-B3GNT10-21:16