Transcript: lnc-B3GNT10-21:22

Basic information

LNCipedia transcript ID: lnc-B3GNT10-21:22 
LNCipedia gene ID: lnc-B3GNT10-21
Location (hg19): chr9:123607588-123613770
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 626 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000611982.4
Alternative gene names: ENSG00000226752.7; PSMD5-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -91.6302 non-coding 
CPAT coding probability 36.79% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-B3GNT10-21:22 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 PSMD5-AS1:16
4.1 PSMD5-AS1:16
5.0 PSMD5-AS1:16
5.1 lnc-B3GNT10-1:22
5.2 lnc-B3GNT10-21:22