Transcript: lnc-B3GNT10-22:1

Basic information

LNCipedia transcript ID: lnc-B3GNT10-22:1 
LNCipedia gene ID: lnc-B3GNT10-22
Location (hg19): chr9:122734939-122736600
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1389 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT134498; FPKM1_group_33806_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -197.996 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-B3GNT10-22:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-295D22.1.1-4:2
4.0 lnc-RP11-295D22.1.1-4:2
4.1 lnc-RP11-295D22.1.1-4:2
5.0 lnc-RP11-295D22.1.1-4:2
5.1 lnc-B3GNT10-6:1
5.2 lnc-B3GNT10-22:1