Transcript: lnc-B3GNT7-4:3

Basic information

LNCipedia transcript ID: lnc-B3GNT7-4:3 
LNCipedia gene ID: lnc-B3GNT7-4
Location (hg19): chr2:232329474-232333724
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4251 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000047028.1|ENCT00000237045.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.4618 non-coding 
CPAT coding probability 17.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-B3GNT7-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC017104.2.1-4:1
5.0 lnc-AC017104.2.1-4:1
5.1 lnc-B3GNT7-4:2
5.2 lnc-B3GNT7-4:3