Transcript: lnc-BBOX1-9:2

Basic information

LNCipedia transcript ID: lnc-BBOX1-9:2 
LNCipedia gene ID: lnc-BBOX1-9
Location (hg19): chr11:27603227-27603601
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 375 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT018509
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 238.656 coding 
CPAT coding probability 90.63% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BBOX1-9:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BBOX1-9:2
4.0 lnc-BBOX1-9:2
4.1 lnc-BBOX1-9:2
5.0 lnc-BBOX1-9:2
5.1 lnc-QSER1-47:2
5.2 lnc-BBOX1-9:2