Transcript: lnc-BCAP31-2:4

Basic information

LNCipedia transcript ID: lnc-BCAP31-2:4 
LNCipedia gene ID: lnc-BCAP31-2
Location (hg19): chrX:152940122-152952247
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 586 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT139091
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -90.3467 non-coding 
CPAT coding probability 2.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BCAP31-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BCAP31-2:4
4.0 lnc-BCAP31-2:4
4.1 lnc-BCAP31-2:4
5.0 lnc-BCAP31-2:4
5.1 lnc-CTAG1B-36:4
5.2 lnc-BCAP31-2:4