Transcript: lnc-BCAT2-2:1

Basic information

LNCipedia transcript ID: lnc-BCAT2-2:1 
LNCipedia gene ID: lnc-BCAT2-2
Location (hg19): chr19:49311046-49314286
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 569 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT067112
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -468.3747 non-coding 
CPAT coding probability 76.36% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BCAT2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HSD17B14-2:2
4.0 lnc-HSD17B14-2:2
4.1 lnc-HSD17B14-2:2
5.0 lnc-HSD17B14-2:2
5.1 lnc-TMEM143-23:1
5.2 lnc-BCAT2-2:1