Transcript: lnc-BCAT2-2:2

Basic information

LNCipedia transcript ID: lnc-BCAT2-2:2 
LNCipedia gene ID: lnc-BCAT2-2
Location (hg19): chr19:49310270-49314286
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 589 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT147002
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -175.135 non-coding 
CPAT coding probability 85.18% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BCAT2-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HSD17B14-2:1
4.0 lnc-HSD17B14-2:1
4.1 lnc-HSD17B14-2:1
5.0 lnc-HSD17B14-2:1
5.1 lnc-TMEM143-23:2
5.2 lnc-BCAT2-2:2