Transcript: lnc-BCKDHB-1:6

Basic information

LNCipedia transcript ID: lnc-BCKDHB-1:6 
LNCipedia gene ID: lnc-BCKDHB-1
Location (hg19): chr6:81153115-81172913
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 571 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011873; NONHSAT113730
Alternative gene names: XLOC_005365; linc-TPBG-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -97.7562 non-coding 
CPAT coding probability 0.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BCKDHB-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BCKDHB-1:6
3.1 lnc-BCKDHB-1:6
4.0 lnc-BCKDHB-1:6
4.1 lnc-BCKDHB-1:6
5.0 lnc-BCKDHB-1:6
5.1 lnc-CYB5R4-28:8
5.2 lnc-BCKDHB-1:6