Transcript: lnc-BCL11B-1:4

Basic information

LNCipedia transcript ID: lnc-BCL11B-1:4 
LNCipedia gene ID: lnc-BCL11B-1
Location (hg19): chr14:99750984-99752177
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 913 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023170; NONHSAT039612
Alternative gene names: XLOC_011119; linc-BCL11B


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -125.4717 non-coding 
CPAT coding probability 9.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BCL11B-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BCL11B-1:4
3.1 lnc-BCL11B-1:4
4.0 lnc-BCL11B-1:4
4.1 lnc-BCL11B-1:4
5.0 lnc-BCL11B-1:4
5.1 lnc-CCDC85C-7:6
5.2 lnc-BCL11B-1:4