Transcript: lnc-BCL11B-5:1

Basic information

LNCipedia transcript ID: lnc-BCL11B-5:1 
LNCipedia gene ID: lnc-BCL11B-5
Location (hg19): chr14:98820737-98823430
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 980 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1055_chr14:98820736-98821930_whiteBloodCell
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.6099 non-coding 
CPAT coding probability 18.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BCL11B-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C14orf64-3:1
4.0 lnc-C14orf64-4:1
4.1 lnc-C14orf64-4:1
5.0 lnc-C14orf64-4:1
5.1 lnc-CCDC85C-31:1
5.2 lnc-BCL11B-5:1