Transcript: lnc-BCOR-1:3

Basic information

LNCipedia transcript ID: lnc-BCOR-1:3 
LNCipedia gene ID: lnc-BCOR-1
Location (hg19): chrX:39710068-39715110
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2443 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000113515.1|MICT00000373311.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -91.0983 non-coding 
CPAT coding probability 1.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BCOR-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BCOR-1:3
5.0 lnc-BCOR-1:3
5.1 lnc-PCSK1N-87:5
5.2 lnc-BCOR-1:3