Transcript: lnc-BEGAIN-3:1

Basic information

LNCipedia transcript ID: lnc-BEGAIN-3:1 
LNCipedia gene ID: lnc-BEGAIN-3
Location (hg19): chr14:101055684-101059393
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3294 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1065_chr14:101055683-101059393_ovary
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -26.4032 non-coding 
CPAT coding probability 13.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BEGAIN-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BEGAIN-3:1
4.0 lnc-BEGAIN-3:1
4.1 lnc-BEGAIN-3:1
5.0 lnc-BEGAIN-3:1
5.1 lnc-CCDC85C-29:1
5.2 lnc-BEGAIN-3:1