Transcript: lnc-BEND6-1:4

Basic information

LNCipedia transcript ID: lnc-BEND6-1:4 
LNCipedia gene ID: lnc-BEND6-1
RefSeq ID: NR_125866
Location (hg19): chr6:56708784-56729136
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 827 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125866; NR_125866.1
Alternative gene names: LOC101930010


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -183.132 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BEND6-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BEND6-1:4
4.0 lnc-BEND6-1:4
4.1 lnc-BEND6-1:4
5.0 lnc-BEND6-1:4
5.1 lnc-HCRTR2-4:7
5.2 lnc-BEND6-1:4