Transcript: lnc-BET1L-2:2

Basic information

LNCipedia transcript ID: lnc-BET1L-2:2 
LNCipedia gene ID: lnc-BET1L-2
Ensembl Gene ID: ENSG00000254468
Ensembl Transcript ID: ENST00000622626
Location (hg19): chr11:112967-125927
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 723 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000622626.1
Alternative gene names: ENSG00000254468.2; RP11-304M2.6; AC069287.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.0428 non-coding 
CPAT coding probability 23.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BET1L-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-BET1L-2:2
4.1 lnc-BET1L-2:2
5.0 lnc-BET1L-2:2
5.1 lnc-OR52A1-115:1
5.2 lnc-BET1L-2:2