Transcript: lnc-BEX2-2:2

Basic information

LNCipedia transcript ID: lnc-BEX2-2:2 
LNCipedia gene ID: lnc-BEX2-2
Location (hg19): chrX:102608467-102612614
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3171 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000114155.1|MICT00000378047.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.2835 non-coding 
CPAT coding probability 5.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BEX2-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BEX2-2:2
5.0 lnc-BEX2-2:2
5.1 lnc-RAB40A-6:2
5.2 lnc-BEX2-2:2