Transcript: lnc-BEX3-2:5

Basic information

LNCipedia transcript ID: lnc-BEX3-2:5 
LNCipedia gene ID: lnc-BEX3-2
Location (hg19): chrX:102659762-102716277
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 888 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT138028
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.6381 non-coding 
CPAT coding probability 3.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BEX3-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NGFRAP1-2:2
4.0 lnc-NGFRAP1-2:2
4.1 lnc-NGFRAP1-2:2
5.0 lnc-NGFRAP1-2:2
5.1 lnc-TEX13C-230:5
5.2 lnc-BEX3-2:5