Transcript: lnc-BIRC7-6:2

Basic information

LNCipedia transcript ID: lnc-BIRC7-6:2 
LNCipedia gene ID: lnc-BIRC7-6
Location (hg19): chr20:61747569-61748555
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 631 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00028587
Alternative gene names: XLOC_013608; linc-BIRC7-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -86.161 non-coding 
CPAT coding probability 0.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BIRC7-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BIRC7-1:2
3.1 lnc-BIRC7-1:1
4.0 lnc-BIRC7-1:1
4.1 lnc-BIRC7-1:1
5.0 lnc-BIRC7-1:1
5.1 lnc-GNAS-59:2
5.2 lnc-BIRC7-6:2