Transcript: lnc-BLM-6:12

Basic information

LNCipedia transcript ID: lnc-BLM-6:12 
LNCipedia gene ID: lnc-BLM-6
Location (hg19): chr15:91382985-91384570
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 333 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00023506
Alternative gene names: XLOC_011350; linc-FURIN


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -289.256 non-coding 
CPAT coding probability 5.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BLM-6:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FURIN-1:2
3.1 lnc-FURIN-1:3
4.0 lnc-FURIN-1:3
4.1 lnc-BLM-6:12
5.0 lnc-BLM-6:12
5.1 lnc-TTLL13P-28:11
5.2 lnc-BLM-6:12