Transcript: lnc-BMI1-2:6

Basic information

LNCipedia transcript ID: lnc-BMI1-2:6 
LNCipedia gene ID: lnc-BMI1-2
Location (hg19): chr10:22737507-22743141
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 459 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018134; NONHSAT011752
Alternative gene names: XLOC_008410; linc-ARMC3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -115.657 non-coding 
CPAT coding probability 3.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BMI1-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BMI1-1:1
3.1 lnc-BMI1-2:1
4.0 lnc-SPAG6-2:5
4.1 lnc-SPAG6-2:5
5.0 lnc-SPAG6-2:5
5.1 lnc-NPY4R2-284:4
5.2 lnc-BMI1-2:6