Transcript: lnc-BMP7-2:2

Basic information

LNCipedia transcript ID: lnc-BMP7-2:2 
LNCipedia gene ID: lnc-BMP7-2
Location (hg19): chr20:55850981-55861630
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 298 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028710; NONHSAT080495
Alternative gene names: XLOC_013812; linc-BMP7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -84.2109 non-coding 
CPAT coding probability 7.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BMP7-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BMP7-2:2
3.1 lnc-BMP7-2:2
4.0 lnc-BMP7-2:2
4.1 lnc-BMP7-2:2
5.0 lnc-BMP7-2:2
5.1 lnc-SPATA2-88:2
5.2 lnc-BMP7-2:2