Transcript: lnc-BNIP1-3:8

Basic information

LNCipedia transcript ID: lnc-BNIP1-3:8 
LNCipedia gene ID: lnc-BNIP1-3
Location (hg19): chr5:172890920-172904499
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 370 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT105185
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.603 non-coding 
CPAT coding probability 14.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BNIP1-3:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BNIP1-3:8
4.0 lnc-BNIP1-3:8
4.1 lnc-BNIP1-3:8
5.0 lnc-BNIP1-3:8
5.1 lnc-ATP6V0E1-19:6
5.2 lnc-BNIP1-3:8