Transcript: lnc-BOC-3:4

Basic information

LNCipedia transcript ID: lnc-BOC-3:4 
LNCipedia gene ID: lnc-BOC-3
Location (hg19): chr3:112880344-112884294
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 917 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006154; NONHSAT091223
Alternative gene names: XLOC_002760; linc-BOC


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -156.9611 non-coding 
CPAT coding probability 3.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BOC-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BOC-1:3
3.1 lnc-GTPBP8-1:7
4.0 lnc-GTPBP8-1:7
4.1 lnc-GTPBP8-1:7
5.0 lnc-GTPBP8-1:7
5.1 lnc-TIMMDC1-82:16
5.2 lnc-BOC-3:4