Transcript: lnc-BORA-31:3

Basic information

LNCipedia transcript ID: lnc-BORA-31:3 
LNCipedia gene ID: lnc-BORA-31
Location (hg19): chr13:68599998-68611278
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1340 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022191; NONHSAT034229
Alternative gene names: XLOC_010419; linc-C13orf34-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -129.4468 non-coding 
CPAT coding probability 11.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BORA-31:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL445989.1-14:2
3.1 lnc-AL445989.1-19:2
4.0 lnc-AL445989.1-19:2
4.1 lnc-AL445989.1-19:2
5.0 lnc-AL445989.1-19:2
5.1 lnc-KL-286:3
5.2 lnc-BORA-31:3