Transcript: lnc-BORCS5-1:1

Basic information

LNCipedia transcript ID: lnc-BORCS5-1:1 
LNCipedia gene ID: lnc-BORCS5-1
Location (hg19): chr12:12626618-12628831
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2214 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT026972
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.7446 non-coding 
CPAT coding probability 14.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BORCS5-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LOH12CR1-3:1
4.0 lnc-LOH12CR1-1:2
4.1 lnc-LOH12CR1-1:2
5.0 lnc-LOH12CR1-1:2
5.1 lnc-BCL2L14-1:6
5.2 lnc-BORCS5-1:1