Transcript: lnc-BPI-33:2

Basic information

LNCipedia transcript ID: lnc-BPI-33:2 
LNCipedia gene ID: lnc-BPI-33
Ensembl Gene ID: ENSG00000285347
Ensembl Transcript ID: ENST00000451435
Location (hg19): chr20:36888577-36922294
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2857 bp
Exons: 3
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000451435.1
Alternative gene names: ENSG00000285347.1; AL359555.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.5259 non-coding 
CPAT coding probability 9.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BPI-33:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-DLGAP4-33:3
5.1 lnc-DLGAP4-33:3
5.2 lnc-BPI-33:2