Transcript: lnc-BPNT1-2:6

Basic information

LNCipedia transcript ID: lnc-BPNT1-2:6 
LNCipedia gene ID: lnc-BPNT1-2
Location (hg19): chr1:220439521-220441057
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1537 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT009594; NR_001587
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.0241 non-coding 
CPAT coding probability 3.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BPNT1-2:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BPNT1-2:6
4.0 lnc-BPNT1-2:6
4.1 lnc-BPNT1-2:6
5.0 lnc-BPNT1-2:6
5.1 lnc-LEFTY2-80:6
5.2 lnc-BPNT1-2:6