Transcript: lnc-BRCC3-2:2

Basic information

LNCipedia transcript ID: lnc-BRCC3-2:2 
LNCipedia gene ID: lnc-BRCC3-2
Location (hg19): chrX:154351141-154369900
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 552 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc004fnm_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -165.8222 non-coding 
CPAT coding probability 0.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BRCC3-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BRCC3-2:2
4.0 lnc-BRCC3-2:2
4.1 lnc-BRCC3-2:2
5.0 lnc-BRCC3-2:2
5.1 lnc-MAGEA11-92:2
5.2 lnc-BRCC3-2:2