Transcript: lnc-BRD1-21:5

Basic information

LNCipedia transcript ID: lnc-BRD1-21:5 
LNCipedia gene ID: lnc-BRD1-21
Location (hg19): chr22:50295108-50296791
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1578 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT087442
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.1928 non-coding 
CPAT coding probability 99.99% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BRD1-21:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALG12-2:4
4.0 lnc-ALG12-2:4
4.1 lnc-ALG12-2:4
5.0 lnc-ALG12-2:4
5.1 lnc-BRD1-9:5
5.2 lnc-BRD1-21:5