Transcript: lnc-BRD1-29:6

Basic information

LNCipedia transcript ID: lnc-BRD1-29:6 
LNCipedia gene ID: lnc-BRD1-29
Location (hg19): chr22:48870120-48885122
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1904 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029734; NONHSAT087378
Alternative gene names: XLOC_014409; linc-CERK-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -35.1831 non-coding 
CPAT coding probability 14.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BRD1-29:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CTA-299D3.8.1-1:1
3.1 lnc-CTA-299D3.8.1-1:1
4.0 lnc-CTA-299D3.8.1-1:1
4.1 lnc-CTA-299D3.8.1-1:1
5.0 lnc-CTA-299D3.8.1-1:1
5.1 lnc-BRD1-20:6
5.2 lnc-BRD1-29:6