Transcript: lnc-BRD3-1:9

Basic information

LNCipedia transcript ID: lnc-BRD3-1:9 
LNCipedia gene ID: lnc-BRD3-1
Location (hg19): chr9:136998919-137000820
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1571 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273249.1|MICT00000368449.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 24.728 non-coding 
CPAT coding probability 45.81% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BRD3-1:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BRD3-1:9
5.0 lnc-BRD3-1:9
5.1 lnc-SURF1-20:7
5.2 lnc-BRD3-1:9

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