Transcript: lnc-BRD3OS-1:2

Basic information

LNCipedia transcript ID: lnc-BRD3OS-1:2 
LNCipedia gene ID: lnc-BRD3OS-1
Location (hg19): chr9:136890612-136894376
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 1064 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235106.4|ENST00000550853.1
Alternative gene names: FLJ35348; bA374P20.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.6083 non-coding 
CPAT coding probability 17.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BRD3OS-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00094:22
5.0 LINC00094:22
5.1 lnc-SURF2-33:2
5.2 lnc-BRD3OS-1:2