Transcript: lnc-BRD3OS-1:3

Basic information

LNCipedia transcript ID: lnc-BRD3OS-1:3 
LNCipedia gene ID: lnc-BRD3OS-1
Location (hg19): chr9:136894083-136897282
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 535 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT135363
Alternative gene names: FLJ35348; bA374P20.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -124.2272 non-coding 
CPAT coding probability 5.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BRD3OS-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WDR5-3:14
4.0 LINC00094:15
4.1 LINC00094:15
5.0 LINC00094:15
5.1 lnc-SURF2-33:3
5.2 lnc-BRD3OS-1:3