Transcript: lnc-BRF1-3:1

Basic information

LNCipedia transcript ID: lnc-BRF1-3:1 
LNCipedia gene ID: lnc-BRF1-3
Location (hg19): chr14:105947012-105947990
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 979 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000022219.1|FTMT25400005348.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -100.3574 non-coding 
CPAT coding probability 3.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BRF1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BRF1-3:1
5.0 lnc-BRF1-3:1
5.1 lnc-AKT1-26:1
5.2 lnc-BRF1-3:1