Transcript: lnc-BRF2-2:3

Basic information

LNCipedia transcript ID: lnc-BRF2-2:3 
LNCipedia gene ID: lnc-BRF2-2
Location (hg19): chr8:37619259-37619998
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 740 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000102219.1|FTMT23000001821.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -66.1058 non-coding 
CPAT coding probability 1.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BRF2-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-863K10.7.1-2:2
5.0 lnc-RP11-863K10.7.1-2:2
5.1 lnc-C8orf86-38:3
5.2 lnc-BRF2-2:3