Transcript: lnc-BRI3BP-8:2

Basic information

LNCipedia transcript ID: lnc-BRI3BP-8:2 
LNCipedia gene ID: lnc-BRI3BP-8
Location (hg19): chr12:125271310-125276024
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3101 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000010780.1|ENCT00000097217.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.2827 non-coding 
CPAT coding probability 9.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BRI3BP-8:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BRI3BP-8:2
5.0 lnc-BRI3BP-8:2
5.1 lnc-RFLNA-8:2
5.2 lnc-BRI3BP-8:2