Transcript: lnc-BUB3-4:13

Basic information

LNCipedia transcript ID: lnc-BUB3-4:13 
LNCipedia gene ID: lnc-BUB3-4
Location (hg19): chr10:125242483-125317756
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2872 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000230131.1|HBMT00000156292.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -45.2405 non-coding 
CPAT coding probability 71.04% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BUB3-4:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BUB3-4:13
5.0 lnc-BUB3-4:13
5.1 lnc-EDRF1-33:13
5.2 lnc-BUB3-4:13