Transcript: lnc-BUB3-4:31

Basic information

LNCipedia transcript ID: lnc-BUB3-4:31 
LNCipedia gene ID: lnc-BUB3-4
Location (hg19): chr10:125319847-125321717
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 385 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00018373
Alternative gene names: XLOC_008653; linc-GPR26-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -62.6007 non-coding 
CPAT coding probability 12.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BUB3-4:31 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPR26-2:6
3.1 lnc-GPR26-3:6
4.0 lnc-GPR26-3:6
4.1 lnc-BUB3-4:31
5.0 lnc-BUB3-4:31
5.1 lnc-EDRF1-33:31
5.2 lnc-BUB3-4:31