Transcript: lnc-C10orf142-1:1

Basic information

LNCipedia transcript ID: lnc-C10orf142-1:1 
LNCipedia gene ID: lnc-C10orf142-1
Location (hg19): chr10:45073475-45086387
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 372 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018191; NONHSAT013038
Alternative gene names: XLOC_008474; linc-TMEM72-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -121.0114 non-coding 
CPAT coding probability 5.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C10orf142-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM72-2:1
3.1 lnc-TMEM72-1:1
4.0 lnc-TMEM72-4:1
4.1 lnc-TMEM72-4:1
5.0 lnc-TMEM72-4:1
5.1 lnc-NPY4R2-62:1
5.2 lnc-C10orf142-1:1