Transcript: lnc-C10orf143-11:5

Basic information

LNCipedia transcript ID: lnc-C10orf143-11:5 
LNCipedia gene ID: lnc-C10orf143-11
Location (hg19): chr10:131933710-131934593
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 884 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000001203.1|FTMT23800007541.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -4.1113 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C10orf143-11:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-EBF3-11:3
5.0 lnc-EBF3-11:3
5.1 lnc-CALY-44:5
5.2 lnc-C10orf143-11:5