Transcript: lnc-C10orf143-46:14

Basic information

LNCipedia transcript ID: lnc-C10orf143-46:14 
LNCipedia gene ID: lnc-C10orf143-46
Ensembl Gene ID: ENSG00000277218
Ensembl Transcript ID: ENST00000612008
Location (hg19): chr10:131902833-131903262
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 430 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000612008.1
Alternative gene names: ENSG00000277218.1; RP11-500G10.5; ; AL139123.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -79.4086 non-coding 
CPAT coding probability 2.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C10orf143-46:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-EBF3-17:1
4.1 LINC00959:16
5.0 LINC00959:16
5.1 lnc-CALY-46:14
5.2 lnc-C10orf143-46:14