Transcript: lnc-C11orf71-1:1

Basic information

LNCipedia transcript ID: lnc-C11orf71-1:1 
LNCipedia gene ID: lnc-C11orf71-1
Location (hg19): chr11:114231357-114250767
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3841 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000534904.1; RP11-64D24.4-001; OTTHUMT00000398958.1; NONHSAT024278
Alternative gene names: ENSG00000256195.1; RP11-64D24.4; OTTHUMG00000168246.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.0221 non-coding 
CPAT coding probability 2.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C11orf71-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C11orf71-1:1
4.0 lnc-C11orf71-1:1
4.1 lnc-C11orf71-1:1
5.0 lnc-C11orf71-1:1
5.1 lnc-DRD2-20:1
5.2 lnc-C11orf71-1:1