Transcript: lnc-C11orf88-2:2

Basic information

LNCipedia transcript ID: lnc-C11orf88-2:2 
LNCipedia gene ID: lnc-C11orf88-2
Location (hg19): chr11:111322064-111327330
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 707 bp
Exons: 6
Sources: Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000528953.1
Alternative gene names: ENSG00000255093.1; RP11-794P6.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -259.8199 non-coding 
CPAT coding probability 86.29% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-C11orf88-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-794P6.2.1-2:2
4.1 lnc-RP11-794P6.2.1-2:2
5.0 lnc-RP11-794P6.2.1-2:2
5.1 lnc-PTS-23:1
5.2 lnc-C11orf88-2:2