Transcript: lnc-C12orf56-3:2

Basic information

LNCipedia transcript ID: lnc-C12orf56-3:2 
LNCipedia gene ID: lnc-C12orf56-3
Location (hg19): chr12:64844226-64845811
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1586 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000012261.1|FTMT24600002892.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -49.6772 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C12orf56-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C12orf56-3:2
5.0 lnc-C12orf56-3:2
5.1 lnc-C12orf56-3:2
5.2 lnc-C12orf56-3:2