Transcript: lnc-C15orf41-18:1

Basic information

LNCipedia transcript ID: lnc-C15orf41-18:1 
LNCipedia gene ID: lnc-C15orf41-18
Ensembl Gene ID: ENSG00000274444
Ensembl Transcript ID: ENST00000620584
Location (hg19): chr15:37401788-37402185
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 398 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000620584.1
Alternative gene names: ENSG00000274444.1; RP11-128A17.2; AC078909.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.1285 non-coding 
CPAT coding probability 5.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C15orf41-18:1 no no no no

Available literature

  1. Chen (2015), Differential lncRNA expression profiles in recurrent gliomas compared with primary gliomas identified by microarray analysis., Int J Clin Exp Med


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C15orf41-18:1
4.1 lnc-C15orf41-18:1
5.0 lnc-C15orf41-18:1
5.1 lnc-TMEM62-153:10
5.2 lnc-C15orf41-18:1