Transcript: lnc-C15orf41-18:9

Basic information

LNCipedia transcript ID: lnc-C15orf41-18:9 
LNCipedia gene ID: lnc-C15orf41-18
Ensembl Gene ID: ENSG00000259460
Ensembl Transcript ID: ENST00000559509
Location (hg19): chr15:37391540-37392374
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 464 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000559509.1; RP11-128A17.1-001; OTTHUMT00000417577.1; NONHSAT041687
Alternative gene names: ENSG00000259460.1; RP11-128A17.1; OTTHUMG00000172260.1; AC078909.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.7388 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C15orf41-18:9 yes no no no

Available literature

  1. Chen (2015), Differential lncRNA expression profiles in recurrent gliomas compared with primary gliomas identified by microarray analysis., Int J Clin Exp Med


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C15orf41-5:1
4.0 lnc-C15orf41-5:1
4.1 lnc-C15orf41-18:9
5.0 lnc-C15orf41-18:9
5.1 lnc-TMEM62-153:6
5.2 lnc-C15orf41-18:9