Transcript: lnc-C16orf95-2:23

Basic information

LNCipedia transcript ID: lnc-C16orf95-2:23 
LNCipedia gene ID: lnc-C16orf95-2
Location (hg19): chr16:87172049-87188136
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 450 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024776; NONHSAT144254
Alternative gene names: XLOC_012051; linc-MTHFSD-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -72.2818 non-coding 
CPAT coding probability 7.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C16orf95-2:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C16orf95-3:1
3.1 lnc-C16orf95-2:1
4.0 lnc-C16orf95.1-2:8
4.1 lnc-C16orf95.1-2:8
5.0 lnc-C16orf95.1-2:8
5.1 lnc-C16orf95-2:15
5.2 lnc-C16orf95-2:23